Mura Lab
at the University of Virginia
Please note:
- † = equal authorship; ∗ = corresponding author
- PDF icons link to local copies; PDB icons link to 3D structures; DOI links to publishers. Author names link to webpages, as available.
- For citation statistics and such, see ResearcherID entry (F-5872-2010); counts are provided below for articles > 1½ yr old.
- Different individuals publish under "C Mura". The following NCBI/Entrez query should be unique and most up-to-date (more so than this page): "mura c[au] AND 1998[PDAT] : 3000[PDAT] AND (mura[lastau] OR williams[lastau] OR eisenberg[lastau] OR marco[lastau] OR sukhodolets[lastau] OR mccammon[lastau] OR sawaya[lastau] OR trylska[lastau]) AND (atlanta[ad] OR los angeles[ad] OR paris[ad] OR la jolla[ad] OR texas[ad] OR virginia[ad] OR warsaw[ad] OR 21352538[pmid] OR 22479120[pmid])". Alternatively, check out 'cmura' on CiteULike (possibly outdated) or Google Scholar (never outdated).
Publications
(reverse chronological order)
| 17) |
Rapid Colorimetric Assays to Qualitatively Distinguish RNA and DNA in Biomolecular Samples
by Jennifer L. Patterson & Cameron Mura* (2012; in prep) |
| 16) |
Computational Chemistry of Molecular Interactions
by Cameron Mura* (2012; forthcoming) |
| 15) |
Abstractions, Algorithms and Data Structures for Structural Bioinformatics
in PyCogent
by Marcin Cieślik, Zygmunt Derewenda, & Cameron Mura* Journal of Applied Crystallography (2011), 44(2), 424–428. ♦ PMID 22479120 ![[PDF version]](/img/acrobatDocIcon.png)
![[DOI link]](/img/doi_logo1b.png)
(Supplementary Materials: text,
use-case 1
 ,
use-case 2
)
|
| 14) |
A Lightweight, Flow-based Toolkit for Parallel and
Distributed Bioinformatics Pipelines
by Marcin Cieślik & Cameron Mura* BMC Bioinformatics (2011), 12(61), 1–11. ![[highly accessed]](/img/highlyaccessed.gif)
♦ PMID 21352538
(Less erroneous version (fewer typos) |
Additional File 1)
|
| 13) |
Molecular Dynamics of Potential rRNA Binders: Single-Stranded Nucleic Acids
and Some Analogues
by Joanna Panecka, Cameron Mura, & Joanna Trylska* Journal of Physical Chemistry B (2011), 115(3), 7794–7806. ♦ PMID 21192664
|
| 12) |
An Introduction to Biomolecular Graphics
by Cameron Mura,* Colin M. McCrimmon, Jason Vertrees, & Michael R. Sawaya PLoS Computational Biology (2010), 6(8): e1000918. ♦ PMID 20865174
(Supplementary Materials)
|
| 11) |
PaPy: Parallel and Distributed Data-processing Pipelines in Python
by Marcin Cieślik & Cameron Mura* Proceedings of SciPy2009: The 8th Annual Conference on Python for Scientific Computing (2009), 41–47. [invited; peer-reviewed] ♦ not indexed by PubMed
|
| 10) |
RapA, the SWI/SNF Subunit of Escherichia coli RNA
Polymerase, Promotes the Release of Nascent RNA from Transcription Complexes
by Brandon Yawn, Lin Zhang, Cameron Mura, & Maxim V. Sukhodolets* Biochemistry (2009), 48, 7794–7806. ♦ PMID 19580329 ♦ cited = 6 (oct2011)
|
| 9) |
Molecular Dynamics of a κB DNA Element: Base Flipping via Cross-strand Intercalative Stacking in a Microsecond-scale Simulation
by Cameron Mura* & J. Andrew McCammon Nucleic Acids Research (2008), 36(15), 4941–4955. ♦ PMID 18653524 ♦ cited = 20 (aug2011)
(Supplementary Website [animations, text, & other info])
|
| 8) |
Sm-like Protein Hfq: Location of the ATP-binding Site
and the Effect of ATP on Hfq•RNA Complexes
by Véronique Arluison, Shravan K. Mutyam, Cameron Mura, Sergio Marco, & Maxim V. Sukhodolets* Protein Science (2007), 16, 1830–1841. ♦ PMID 17660259 ♦ cited = 9 (aug2011)
|
| 7) |
Three-dimensional Structures of Fibrillar Sm Proteins:
Hfq and Other Sm-like Proteins
by Véronique Arluison,†∗ Cameron Mura,† Maria Romero-Guzmán, Jean Liquier, Olivier Pellegrini, Mari Gingery, Philippe Régnier, & Sergio Marco Journal of Molecular Biology (2006), 356(1), 86–96. ♦ PMID 16337963 ♦ cited = 13 (aug2011)
(Supplementary Materials)
Popular scientific coverage:
2006 San Diego Supercomputer Center (SDSC) Wall Calendar (Ms December) 2004 PDB Holiday Postcard (not from my work, but same Sm-like protein that was part of this study) |
| 6) |
Structure and Assembly of an Augmented Sm-like Archaeal
Protein 14-mer
by Cameron Mura, Martin Phillips, Anna Kozhukhovsky, & David Eisenberg* Proceedings of the National Academy of Sciences USA (2003), 100(8), 4539–4544. ♦ PMID 12668760 ♦ cited = 21 (aug2011)
|
| 5) |
The Oligomerization and Ligand-binding Properties of
Sm-like Archaeal Proteins (SmAPs)
by Cameron Mura, Anna Kozhukhovsky, Mari Gingery, Martin Phillips, & David Eisenberg* Protein Science (2003), 12, 832–847. ♦ PMID 12649441 ♦ cited = 23 (aug2011)
Popular scientific coverage:
Cover Illustration 2003 PDB Holiday Postcard 2003 PDB Annual Report (see last page) |
| 4) |
Structure and Function of an Archaeal Homolog of
Survival Protein E (SurEα):
An Acid Phosphatase with Purine Nucleotide Specificity
by Cameron Mura, Jonathan E. Katz, Steven G. Clarke, & David Eisenberg* Journal of Molecular Biology (2003), 326(5), 1559–1575. ♦ PMID 12595266 ♦ cited = 13 (aug2011)
(Supplementary Materials;
Erratum [HTML,
PDF])
|
| 3) |
Structure of a Nudix Protein from Pyrobaculum aerophilum Reveals a
Dimer with Two Intersubunit β-Sheets
by Shuishu Wang, Cameron Mura, Michael R. Sawaya, & David Eisenberg* Acta Crystallographica Section D (2002), 58, 571–578. ♦ PMID 11914479 ♦ cited = 15 (aug2011)
|
| 2) |
The Crystal Structure of a Heptameric Archaeal Sm Protein:
Implications for the Sm Core of Eukaryotic SnRNPs
by Cameron Mura, Duilio Cascio, Michael R. Sawaya, & David Eisenberg* Proceedings of the National Academy of Sciences USA (2001), 98, 5532–5537. ♦ PMID 11331747 ♦ cited = 70 (aug2011)
|
| 1) |
Oxyanion-Mediated Inhibition of Serine Proteases
by Steven R. Presnell, Girish S. Patil, Cameron Mura, Kevin M. Jude, Jennifer M. Conley, Jay A. Bertrand, Chih-Min Kam, James C. Powers, & Loren Dean Williams* Biochemistry (1998), 37, 17068–17081. ♦ PMID 9836602 ♦ cited = 18 (aug2011)
|